Last updated on April 16th, 2026 at 05:12 pm
If you want to make waffles and pancakes ahead and freeze them for easy breakfasts, fresh milled flour is one of the best ways to do it. You get light, fluffy texture with a richer, slightly nutty flavor, plus the added benefit of more fiber, protein, and nutrients compared to store-bought flour.
Milling your own whole grains keeps all the natural vitamins, minerals, and oils intact, so you’re not just stocking your freezer… you’re stocking it with better food your family will actually enjoy.
If you’re new to milling, start with my How to Start Milling Your Own Flour at Home guide to get set up.

- Fresh milled flour waffles and pancakes freeze beautifully for quick, from-scratch breakfasts
- Let them cool completely before freezing to prevent soggy texture
- Flash freeze in a single layer first, then transfer to an airtight container or freezer bag
- Store for up to 3 months for best quality
- Reheat in a toaster, oven, or air fryer for the best texture
At Hollis Homestead, we’re working toward an ingredient household where everything starts with real, from-scratch ingredients, including fresh milled flour. Milling your own flour keeps the fiber, vitamins, minerals, and natural oils intact, giving you more nutrition and better flavor than store-bought flour.
One of our favorite ways to use it is for homemade waffles and pancakes that we batch cook and freeze for later. It’s an easy way to keep real food on hand without starting from scratch every morning, just like pasta made with fresh milled flour, and how to freeze it for easy meal prep.
From-scratch cooking doesn’t have to be complicated. With a little prep, you can stock your freezer with meals that are both convenient and genuinely nourishing.
Jump to:
- Equipment
- Fresh Milled Flour Waffles and Pancakes Ingredients
- How to Make Fresh Milled Flour Waffles and Pancakes
- Can You Freeze Fresh Milled Flour Waffles and Pancakes?
- Best Ways to Reheat Frozen Waffles and Pancakes
- Why Fresh Milled Flour Works So Well for Waffles and Pancakes
- Higher Protein, Better-For-You Breakfast
- Tips for the Best Pancakes & Waffles
- Frequently Asked Questions
- More Fresh Milled Flour Recipes
- Fresh Milled Flour Waffles & Pancakes and How to Freeze
Equipment
Fresh Milled Flour Waffles and Pancakes Ingredients
- Freshly milled flour
- Baking soda
- Baking powder
- Salt
- Eggs
- Whole milk (or 1 cup of milk and 1 cup of buttermilk)
- Olive oil (or melted butter)
- Vanilla extract (optional, but adds great flavor)




How to Make Fresh Milled Flour Waffles and Pancakes
- Mill the flour
Mill white wheat berries into a fine, light flour. - Mix dry ingredients
In a large bowl, whisk together flour, baking powder, baking soda, and salt. - Mix wet ingredients
In a separate bowl, whisk eggs, milk, oil or melted butter, and vanilla. - Make the batter
Stir wet ingredients into dry until just combined. Do not overmix. - Cook pancakes
Heat a skillet over medium heat and lightly grease. Pour about ¼ cup batter per pancake. Cook until bubbles form, flip, and cook until golden. - Cook waffles
Preheat waffle maker and grease if needed. Add batter and cook until golden and crisp.
Can You Freeze Fresh Milled Flour Waffles and Pancakes?
Yes, fresh milled flour waffles and pancakes freeze just as well as those made with store-bought flour. As long as they are cooled completely and stored properly, they hold their texture and reheat beautifully.
- Let them cool completely: Place waffles or pancakes on a wire rack and allow them to cool fully. This prevents trapped steam, which can lead to soggy texture.
- Flash freeze: Arrange in a single layer on a baking sheet and freeze for 1 to 2 hours, or until solid. This keeps them from sticking together.
- Store properly: Transfer to a freezer-safe bag or airtight container. Remove as much air as possible to prevent freezer burn.
- Label and freeze: Label with the date and store for up to 3 months for best quality.

Best Ways to Reheat Frozen Waffles and Pancakes
Reheating properly is key to getting that fresh, from-scratch texture back. Skip the microwave if you can, it tends to make them soft instead of crisp.
- Toaster
Best for waffles. Toast on a medium setting until hot and crisp. - Toaster oven
Works well for both pancakes and waffles with even heating. - Air fryer
Great for crispy waffles without drying them out. Heat at 350°F for 3 to 4 minutes. - cast-ironSkillet
Warm pancakes in a cast iron or nonstick skillet over medium heat to bring back that fresh texture.
Why Fresh Milled Flour Works So Well for Waffles and Pancakes
Fresh milled flour doesn’t just improve nutrition, it also creates better texture and flavor. Hard white wheat is a great choice because it produces light, fluffy waffles and pancakes while still providing the fiber and protein of whole grains.
Unlike store-bought whole wheat flour, which can taste bitter, freshly milled flour has a naturally mild, slightly nutty flavor that makes these breakfasts taste even better.
For extra fluffy pancakes, let the batter rest for a few minutes before cooking.

Using soft white wheat instead of hard white wheat creates a more delicate texture, which works especially well for whole wheat waffles and pancakes. For extra crispiness, you can also mix in a small amount of corn flour.
If you’re used to all-purpose flour, there may be a short learning curve when switching to fresh milled flour. But the flavor and nutrition are worth it. You’ll notice it right away with a deeper, richer taste that’s completely different from store-bought flour.
Higher Protein, Better-For-You Breakfast
Making waffles and pancakes with fresh milled flour gives you a more balanced, higher protein breakfast compared to typical store-bought options. Because you’re using the whole grain, including the bran and germ, you’re getting more natural protein, fiber, and nutrients in every bite.
When paired with ingredients like eggs and milk, these homemade waffles and pancakes become a more filling breakfast that helps keep you satisfied longer, without needing specialty “protein” products.
It’s also a much more affordable way to stock your freezer. Pre-made high-protein waffles at the store can be expensive, but making your own in batches gives you the same convenience with better ingredients and a lower cost.
Tips for the Best Pancakes & Waffles
- Use fresh flour – Milling just before baking gives the best texture and flavor
- Do not overmix – A slightly lumpy batter makes fluffier pancakes and better waffles
- Let the batter rest – This helps create thicker, softer pancakes
- Use the right surface – Cast iron for pancakes, a good waffle iron for waffles
- Adjust consistency – Add milk for thinner batter or let it rest longer for thicker
- Choose simple toppings – Fresh fruit, maple syrup, butter, or nut butter all work well
Frequently Asked Questions
How long do frozen waffles and pancakes last?
Frozen waffles and pancakes are best used within 2 to 3 months for the best texture and flavor. They are still safe to eat after that, but quality may start to decline.
Can you freeze pancake batter?
It is not recommended to freeze pancake batter. The leavening agents do not perform as well after freezing, which can result in dense pancakes. For best results, cook the pancakes first, then freeze.
Why are my waffles or pancakes soggy after freezing?
This usually happens when they were not fully cooled before freezing or were reheated in the microwave. Let them cool completely, flash freeze, and reheat in a toaster, oven, or air fryer for the best texture.
Can you freeze waffles or pancakes with toppings?
It is best to freeze them plain. Syrup, butter, or fruit can add moisture and affect texture during freezing. Add toppings after reheating for best results.
Can you refreeze waffles or pancakes?
You can refreeze them if they were thawed safely, but the texture may decline. For best quality, only freeze once and store in portions so you can grab what you need.
Do fresh milled flour waffles and pancakes freeze differently?
They freeze just as well as those made with store-bought flour. Because fresh milled flour retains more natural oils and moisture, proper cooling and reheating are key to keeping the texture light and not soggy.
More Fresh Milled Flour Recipes
If you’re building a from-scratch kitchen, fresh milled flour recipes are a great place to start. Don’t miss my getting started with fresh milled flour guide, this easy fresh milled flour sandwich bread recipe, and these fresh milled flour tortillas.

Fresh Milled Flour Waffles & Pancakes and How to Freeze
Equipment
Ingredients
- 400 g freshly milled hard white wheat or soft white wheat flour I prefer hard wheat
- 1 teaspoon baking soda
- 1 teaspoon baking powder
- 1 teaspoon salt
- 2 fresh eggs
- 2 cups whole milk or 1 cup of milk and 1 cup of buttermilk
- 60 g olive oil or melted butter
- 1 teaspoon vanilla extract optional, but adds great flavor
Instructions
- Mill your flour – Start by milling white wheat berries to get a fine, light texture.
- Mix dry ingredients – In a large mixing bowl, whisk together the fresh flour, baking soda, baking powder, and salt.
- Combine wet ingredients – In a medium bowl, whisk the eggs, whole milk, oil (or melted butter), and vanilla extract.
- Make the batter – Slowly stir the wet ingredients into the dry mix, using a whisk or spoon until just combined. Be careful not to overmix—this keeps the pancakes and waffles light and fluffy.
- Cook the pancakes – Heat a cast iron or nonstick skillet over medium heat and lightly grease with butter or oil. Pour about ¼ cup of batter per pancake and cook until bubbles form on the surface. Flip and cook for another minute or so until golden brown. For thicker pancakes, let the batter sit for a few minutes before cooking.
- Cook the waffles – Preheat your waffle maker and lightly grease it if needed. Pour the waffle batter in, close the lid, and cook according to your waffle iron’s instructions until crisp and golden brown. A good waffle should be crispy on the outside and tender inside.
Freezer Instructions
- Cool completely – Let the waffles and pancakes cool on a parchment-lined baking sheet.
- Flash Freeze – Lay them on a parchment-lined baking sheet and freeze for 1-2 hours. (you can even layer them with parchment in between if needed)
- Store in an airtight container – Once frozen, place them in an airtight container or freezer bag, removing as much air as possible.
- Storage – These can be kept in the freezer for up to 3 months.









Julie says
How many grams of berries are needed to make 400 grams freshly milled flour?
Kris says
I find when a recipe calls for weight, it's a 1:1 ratio. So for this recipe you'd mill 400g of berries for 400g of flour. the only time the ratio is different is when you go by volume (ie cups) because flour is fluffier than wheat berries and thus you need lower volume of berries for a higher volume of flour. hope that helps!
Amber says
400g of wheat berries equals 400g of flour.
Elizabeth says
The whole family enjoys this recipe! My husband has Alpha-Gal, so I make him his own personal batch. I substitute regular milk for Almond milk and use the oil as suggested in the recipe. It turns out great every time!
Amber says
I'm so glad you like the recipe and it's great to know there is dairy free version that works well too. Thanks for sharing.